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应用数学讨论班:UIUC赵志珍主讲

来源:清华大学丘成桐数学科学中心 05-26

时间:5月27日 10:00-11:00

地点:Zoom Meeting: 536-366-394

组织者:赵志珍 Zhizhen Jane Zhao (UIUC)

主讲人:赵志珍 Zhizhen Jane Zhao (UIUC)

讲座提要:

Cryo-electron microscopy (EM) single particle reconstruction is an entirely general technique for 3D structure determination of macromolecular complexes. This talk focuses on the algorithms for 2D class averaging and 3D reconstruction for the single-particle images, assuming no conformation changes of the macromolecules. In the first part, I will introduce the multi-frequency vector diffusion maps to improve the efficiency and accuracy of cryo-EM 2D image classification and denoising. This framework incorporates different irreducible representations of the estimated alignment between similar images. In addition, we use a graph filtering scheme to denoise the images using the eigenvalues and eigenvectors of the MFVDM matrices. In the second part, I will present a 3D reconstruction approach, which follows a line of works starting from Kam (1977) that employs the autocorrelation analysis for the single particle reconstruction. At the end of the talk, I will briefly review the challenges and existing approaches for addressing the continuous heterogeneity in cryo-EM data.



主讲人介绍:

Zhizhen Zhao is an Assistant Professor in the Department of Electrical and Computer Engineering at the University of Illinois at Urbana-Champaign. She joined University of Illinois in 2016. From 2014 to 2016, she was a Courant Instructor at the Courant Institute of Mathematical Sciences, New York University. She received the B.A. and M.Sc. degrees in physics from Trinity College, Cambridge University in 2008, and the Ph.D. degree in physics from Princeton University in 2013. She is a recipient of Alfred P. Sloan Research Fellowship (2020--2022). Her research interests include computational imaging, data science, and machine learning.

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